Job Description P0ACC1 Confidence 97.35% Date Wed Jan 25 15:20:23 GMT 2012 Rank 322 Aligned Residues 150 % Identity 14% Template c3me5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna cytosine methylase from shigella2 flexneri 2a str. 301 Resolution 1.75 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		A	R	L	P	E	Q	P	C	R	I	L	D	L	G	T	G	T	G	A	I	A	L	A	L	A	S	E	R	P	D	C	E	I	I	A	V	D	R	M	P	D	A	V	S	L	A	Q	R	N	A	Q	H	L	A	I	K	N	I	H	I	L	Q	S	D	W	F	S	A	L	A	G	Q	Q	F	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																.																																												.	.	.	.	.	.
Template Conservation																																.
Template Sequence		E	H	H	P	H	Y	A	F	R	F	I	D	L	F	A	G	I	G	G	I	R	R	G	F	E	S	I	G	G	Q	.	C	V	F	T	S	E	W	N	K	H	A	V	R	T	Y	K	A	N	H	Y	C	D	P	A	T	H	H	F	N	E	D	I	R	D	I	T	L	S	H	Q	E	G	V	S	D	E	A	A	A
Template Known Secondary structure		T	T	T	T			S							S		T	T	S								T	T	T			.																			S				T	T	T					S		T						T	T		T	T	S
Template Predicted Secondary structure																																.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
												178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.									.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	M	I	V	S	N	P	P	Y	I	D	E	Q	D	P	H	L	Q	Q	G	D	V	R	F	E	P	L	T	A	L	V	A	A	D	S	G	M	A	D	I	V	H	I	I	E	Q	S	R	N	A	L	V	S	G	G	F	L	L	L	E	.	.	.	.	.	.	.	.	H	G
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.						.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.
Template Sequence		E	H	I	R	Q	H	I	P	E	H	D	V	L	L	A	G	F	P	C	Q	P	F	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	Q	G	T	L	F	F	D	V	V	R	I	I	D	A	.	R	R	P	A	.	X	F	V	L	E	N	V	K	N	L	K	S	H	D	K
Template Known Secondary structure								S				S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S												.				S	.								T	T	T	T	T	G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Q	G	E	A	V	R	Q	A	F	I	L	A	G	Y	H	D	V	E	T	C	R	D	Y	G	D	N	E	R	V	T	L	G	R	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	T	F	R	I	I	X	Q	T	L	D	E	L	G	Y	D	V	A	D	A	E	D	N	G	P	D	D	P	K	I	I	D	G	K	H	F
Template Known Secondary structure		G													T	T				T	T	T	T			S	T	T		T	T				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions