322 c3me5A_ Probab=97.35   E-value=0.0015  Score=39.88  Aligned_columns=150  Identities=14%

Q ss_pred             HHCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC------
Q ss_conf             61566897799944886689999998489978999878989999999999872986432112102220111166------
Q batch____       104 ARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQF------  177 (277)
Q Consensus       104 ~~~~~~~~~vLDlgcGtG~~~~~la~~~~~~~v~gvDis~~~l~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~------  177 (277)
                      ...|...-+++|++||.|.++..+.+..-. .+.++|+++.+++.-+.|.......+.....-...........      
T Consensus        59 ~~~~~~~~~~idLFaG~GGls~Gl~~aG~~-~v~a~E~d~~A~~Ty~~N~~~~~~~~~~~~DI~~i~~~~~~~~~~~~~~  137 (414)
T c3me5A_          59 EHHPHYAFRFIDLFAGIGGIRRGFESIGGQ-CVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAA  137 (414)
T ss_dssp             TTTTCCSEEEEEESCTTSHHHHHHHTTTEE-EEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred             CCCCCCCCEEEEECCCCCHHHHHHHHCCCE-EEEEEECCHHHHHHHHHHCCCCCCCEEECCCHHHCCHHHHHCCCCCCCC
T ss_conf             557898603998428847887999984985-9999609989999998855888653042285122696563202133431


Q ss_pred             ----------CEEEECCCCCCHHHHHHCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE--------EC
Q ss_conf             ----------179866822432456522712034003320256442378999999999863888589998--------37
Q batch____       178 ----------AMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE--------HG  239 (277)
Q Consensus       178 ----------d~iv~npp~~~~~~~~~l~~~~~~~~~~al~~~~~g~~~~~~~~~~~~~~L~p~G~l~~e--------~~  239 (277)
                                |+.++++|.-..+                    +.....+..+++.+.. ++|. .+++|        ..
T Consensus       138 d~l~~g~Pcqd~s~aG~pc~~~s--------------------d~r~~L~~~~~riI~~-~kPk-~filENV~glls~~~  195 (414)
T c3me5A_         138 EHIRQHIPEHDVLLAGFPCQPFC--------------------DTQGTLFFDVVRIIDA-RRPA-XFVLENVKNLKSHDK  195 (414)
T ss_dssp             HHHHHHSCCCSEEEEECCCCCCC--------------------TTTTSHHHHHHHHHHH-HCCS-EEEEEEETTTTTGGG
T ss_pred             CEECCCCCCCCCCCCCCCCCCCC--------------------CCHHHHHHHHHHHHHH-CCCC-EEEEECCHHHHHCCC
T ss_conf             03206799984702787777886--------------------4025489999999965-2987-699853177873288


Q ss_pred             CCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEE
Q ss_conf             9758999999997599059998067889828998742
Q batch____       240 WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY  276 (277)
Q Consensus       240 ~~~~~~v~~~l~~~Gf~~v~v~~D~~~~~R~v~a~~~  276 (277)
                      ....+.+.+.|++.|+..-...-+.....+++-|.|+
T Consensus       196 ~~~~~~i~~~L~~lGY~v~~~~l~~~~~~~vl~A~~G  232 (414)
T c3me5A_         196 GKTFRIIXQTLDELGYDVADAEDNGPDDPKIIDGKHF  232 (414)
T ss_dssp             GHHHHHHHHHHHHTTEEETTTTCCSTTCTTEEEGGGT
T ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCCC
T ss_conf             1589999999998698278602345556267520118