|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | K | S | E | L | I | E | R | L | A | T | Q | Q | S | H | I | P | A | K | T | V | E | D | A | V | K | E | M | L | E | H | M | A | S | T | L | A | Q | G | E | R | I | E | I | R | G | F | G | S | F | S | L | H | Y | R | A | P | R | T | G | R | N | P | K | T | G | D | K | V | E | L | E | G | K | Y | V | P | H | F |
Query Conservation |   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|   |   |
|
| . |   |   |   |   | . |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
Template Sequence |   |
M | N | K | S | Q | L | I | D | K | I | A | . |
A | G | A | D | . |
S | K | A | A | A | G | R | A | L | D | A | I | I | A | S | V | T | E | S | L | K | E | G | D | D | V | A | L | V | G | F | G | T | F | A | V | K | E | R | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | V | P | S | F |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . |  | T | T |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  | T | T | T |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | |
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 60 |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | G | K | E | L | R | D | R | A | N |
Query Conservation |   |
|
|
|
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |   |
|
|
Template Sequence |   |
R | A | G | K | A | L | K | D | A | V | N |
Template Known Secondary structure |   |
 |  |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 |
  |