|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | K | S | E | L | I | E | R | L | A | T | Q | Q | S | H | I | P | A | K | T | V | E | D | A | V | K | E | M | L | E | H | M | A | S | T | L | A | Q | G | E | R | I | E | I | R | G | F | G | S | F | S | L | H | Y | R | A | P | R | T | G | R | N | P | K | T | G | D | K | V | E | L | E | G | K | Y | V | P | H | F |
Query Conservation |   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |   |
|
| . |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |
|   |
|
Template Sequence |   |
M | N | K | T | E | L | I | K | A | I | A | . |
Q | D | T | G | L | T | Q | V | S | V | S | K | M | L | A | S | F | E | K | I | I | T | E | T | V | A | K | G | D | K | V | Q | L | T | G | F | L | N | I | K | P | V | A | R | Q | A | R | K | G | F | N | P | Q | T | Q | E | A | L | E | I | A | P | S | V | G | V | S | V |
Template Known Secondary structure |   |
|
| T | T |  |  |  |  |  |  |  | . |  |  |  |
| S |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| B | T | T | T | B |
|
|
|
|
|
|
|
|
|
|
|
|
|
| S | S | S | S | S |
|
|
|
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | G | K | E | L | R | D | R | A | N |
Query Conservation |   |
|
|
|
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |   |
|
|
Template Sequence |   |
K | P | G | E | S | L | K | K | A | A | E |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 |
  |