Job Description P0A6Y1 Confidence 99.90% Date Thu Jan 5 11:04:12 GMT 2012 Rank 6 Aligned Residues 91 % Identity 32% Template c2np2B_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:hbb; PDBTitle: hbb-dna complex Resolution 3.02 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																															.
Query SS confidence															.	.	.	.																																															.
Query Sequence		M	T	K	S	E	L	I	E	R	L	A	T	Q	.	.	.	.	Q	S	H	I	P	A	K	T	V	E	D	A	V	K	E	M	L	E	H	M	A	S	T	L	A	Q	G	E	R	I	E	I	R	G	F	G	S	F	S	L	H	Y	R	A	P	R	.	T	G	R	N	P	K	T	G	D	K	V	E	L	E	G	K
Query Conservation															.	.	.	.																																															.
Alig confidence															.	.	.	.																																															.
Template Conservation
Template Sequence		V	T	K	S	D	I	V	D	Q	I	A	L	N	I	K	N	N	N	L	K	L	E	K	K	Y	I	R	L	V	I	D	A	F	F	E	E	L	K	S	N	L	C	S	N	N	V	I	E	F	R	S	F	G	T	F	E	V	R	K	R	K	G	R	L	N	A	R	N	P	Q	T	G	E	Y	V	K	V	L	D	H
Template Known Secondary structure																		T	T																									T	T						T	T	T											B	S	S		B		T	T	T			B			B
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	P	H	F	K	P	G	K	E	L	R	D	R	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	A	Y	F	R	P	G	K	D	L	K	E	R	V	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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