Job Description P0A6Y1 Confidence 99.93% Date Thu Jan 5 11:04:12 GMT 2012 Rank 2 Aligned Residues 93 % Identity 33% Template c2iifA_ PDB info PDB header:recombination/dna Chain: A: PDB Molecule:integration host factor; PDBTitle: single chain integration host factor mutant protein (scihf2-2 k45ae) in complex with dna Resolution 2.72 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	K	S	E	L	I	E	R	L	A	T	Q	Q	S	H	I	P	A	K	T	V	E	D	A	V	K	E	M	L	E	H	M	A	S	T	L	A	Q	G	E	R	I	E	I	R	G	F	G	S	F	S	L	H	Y	R	A	P	R	T	G	R	N	P	K	T	G	D	K	V	E	L	E	G	K	Y	V	P	H	F
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		L	T	K	A	E	M	S	E	Y	L	F	D	K	.	L	G	L	S	K	R	D	A	K	E	L	V	E	L	F	F	E	E	I	R	R	A	L	E	N	G	E	Q	V	E	L	S	G	F	G	N	F	D	L	R	D	K	N	Q	R	P	G	R	N	P	K	T	G	E	D	I	P	I	T	A	R	R	V	V	T	F
Template Known Secondary structure		B													.																									T	T						T	T	T											B					T	T	T						B
Template Predicted Secondary structure															.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	K	E	L	R	D	R	A	N	I	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	G	Q	K	L	K	S	R	V	E	N	A	G
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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