Job Description P16688 Confidence 44.78% Date Wed Jan 25 15:20:39 GMT 2012 Rank 7 Aligned Residues 43 % Identity 19% Template c3eg9B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sec24 related gene family, member d; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin Resolution 3.00 Å

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		222	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.														.	.	.	.
Query SS confidence							.	.	.														.	.	.	.
Query Sequence		V	E	S	L	D	.	.	.	F	D	D	H	P	F	T	V	Q	Q	W	D	E	.	.	.	.	P	C	A	I	C	G	S	T	H	S	Y	L	D	E	V	V	L	D	D	A	G	N	R	M	F	V	C	S
Query Conservation							.	.	.														.	.	.	.
Alig confidence							.	.	.														.	.	.	.								.	.	.
Template Conservation																																		.	.	.
Template Sequence		I	K	P	F	A	T	I	P	S	N	E	S	P	L	Y	L	V	N	H	G	E	S	G	P	V	R	C	N	R	C	K	A	.	.	.	Y	M	C	P	F	M	Q	F	I	E	G	G	R	R	Y	Q	C	G
Template Known Secondary structure				T	T					T	T	S									T	T	T		S		B		T	T	T			.	.	.	B	S		T	T					G	G	G	T					T
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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