Job Description P16688 Confidence 12.38% Date Wed Jan 25 15:20:39 GMT 2012 Rank 56 Aligned Residues 43 % Identity 16% Template c3eg9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin Resolution 3.00 Å

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		V	E	S	L	D	F	D	D	H	P	F	T	V	Q	Q	W	D	E	P	C	A	I	.	.	C	G	S	T	H	S	Y	L	D	E	V	V	L	D	D	A	G	N	R	M	F	V	C	S
Query Conservation																								.	.
Alig confidence																								.	.				.	.	.
Template Conservation																													.	.	.
Template Sequence		F	T	P	L	K	E	R	P	D	L	P	P	I	Q	Y	E	P	V	L	C	S	R	T	T	C	R	A	.	.	.	V	L	N	P	L	C	Q	V	D	Y	R	A	K	L	W	A	C	N
Template Known Secondary structure				T	T				T	T	S					S				B		S		T	T	T			.	.	.	B			T	T	S				T	T	T	T					T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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