Phyre 2 alignment of P16688 with c1ar1B

Job Description P16688
Confidence 10.39% Date Wed Jan 25 15:20:39 GMT 2012

Rank 71 Aligned Residues 35

% Identity 29% Template c1ar1B_

PDB info PDB header:complex (oxidoreductase/antibody) Chain: B: PDB Molecule:cytochrome c oxidase; PDBTitle: structure at 2.7 angstrom resolution of the paracoccus2 denitrificans two-subunit cytochrome c oxidase complexed3 with an antibody fv fragment

Resolution 2.70 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence	R	I	Y	A	V	P	P	F	T	R	V	E	S	L	D	F	D	D	H	P	F	T	V	Q	Q	W	D	E	P	C	A	.	I	C	G	S	T	H	S	Y
Query Conservation																																.
Alig confidence																		.	.	.	.											.
Template Conservation																		.	.	.	.
Template Sequence	K	Q	D	A	V	P	G	R	I	A	Q	L	W	F	S	V	D	.	.	.	.	Q	E	G	V	Y	F	G	Q	C	S	E	L	C	G	I	N	H	A	Y
Template Known Secondary structure						T	T										S	.	.	.	.	S	S									S			S	T	T	T	T	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
	191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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