 |
Job Description | P03841 | Confidence | 10.60% | Date | Thu Jan 5 10:58:04 GMT 2012 |
Rank | 43 | Aligned Residues | 54 |
% Identity | 15% | Template | c3s9jA_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:member of duf4221 family; |
PDBTitle: crystal structure of a member of duf4221 family (bvu_1028) from2 bacteroides vulgatus atcc 8482 at 1.75 a resolution
|
Resolution | 1.75 Å |
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | . | . | . | . | . | . | |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | L | I | L | D | Q | N | M | T | P | S | A | F | F | P | S | S | Y | F | T | Y | Q | E | P | G | V | M | . |
. |
S | A | D | R | L | E | G | V | M | R | L | T | . |
P | A | L | G | Q | Q | K | L | Y | V | L | V | F | T |
Query Conservation |   |
  |
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   | . | . |   |   |   |
|
|
|   |   |
|   |
|   | . |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|
|   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |   |
|
|   |
|   |
|   |   |
|   |
Template Sequence |   |
S | V | I | V | L | N | A | D | F | E | I | I | G | E | T | K | F | P | G | K | K | Y | F | Y | K | X | S | F | V | G | R | E | G | L | Y | I | S | E | N | N | L | E | N | P | Q | F | D | E | N | K | L | V | F | T | C | F | K |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
|
|
| T | T | S | T | T |
|
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|