Job Description P03841 Confidence 8.28% Date Thu Jan 5 10:58:04 GMT 2012 Rank 58 Aligned Residues 108 % Identity 6% Template c3bx6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:alpha-1-acid glycoprotein; PDBTitle: crystal structure of human alpha 1 acid glycoprotein Resolution 1.80 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	I	S	G	P	V	A	A	Y	S	V	P	A	N	I	G	E	L	T	L	T	L	T	S	E	V	N	K	Q	T	S	V	F	A	P	N	V	L	I	L	D	Q	N	M	T	P	S	A	F	F	P	S	S	Y	F	T	Y	Q	E	P	G	V	M	S	A	D	R	L	E	G	V	M	R	L	T	P	A	L	G
Query Conservation
Alig confidence																																																																														.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		Q	E	I	Q	A	T	F	F	Y	F	T	P	N	K	T	E	D	T	I	F	L	R	E	Y	Q	T	R	Q	D	Q	C	I	Y	N	T	T	Y	L	N	V	Q	R	E	N	G	T	I	S	R	Y	V	G	G	Q	E	H	F	A	H	L	L	I	L	R	D	T	K	T	Y	M	L	A	F	D	V	N	.	.	.	D
Template Known Secondary structure		T	T												T	T	T	T											T	T													T	T	T	T							T	T											S	S	T	T								S	S	.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	K	L	Y	V	L	V	F	T	T	E	K	D	L	Q	Q	T	T	Q	L	L	D	P	A	K	A	Y	A	K	G	V	G
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		E	K	N	W	G	L	S	V	Y	A	D	K	P	E	T	T	K	E	Q	L	G	E	.	.	F	Y	E	A	L	D	C	L	R
Template Known Secondary structure		G	G	G								S	S	S				T	T	T	T			.	.									T
Template Predicted Secondary structure																								.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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