Job Description P03841 Confidence 7.46% Date Thu Jan 5 10:58:04 GMT 2012 Rank 65 Aligned Residues 141 % Identity 11% Template c2r73C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:trichosurin; PDBTitle: crystal structure of the possum milk whey lipocalin2 trichosurin at ph 8.2 Resolution 2.50 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	P	V	D	Q	S	K	T	Q	T	T	Q	L	A	T	G	G	Q	Q	L	N	V	P	G	I	S	G	P	V	A	A	Y	S	V	P	A	N	I	G	E	L	T	L	T	L	T	S	E	V	N	K	Q	T	S	V	F	A	P	N	V	L	I	L	D	Q	N	M	T	P	S	A	F	F	P	S	S	Y	F	T
Query Conservation
Alig confidence							.																																																																									.
Template Conservation							.																																																																									.
Template Sequence		W	E	Q	L	S	.	R	H	W	H	T	V	V	L	A	S	S	D	R	S	L	I	E	E	E	G	P	F	R	N	F	I	Q	N	I	T	V	E	S	G	N	L	N	G	F	F	L	T	R	K	N	G	Q	C	I	P	L	Y	L	T	A	F	K	T	E	E	A	R	Q	F	K	L	N	Y	Y	G	T	N	.	D
Template Known Secondary structure			G	G	G		.	S	B									S	S					S	T	T		T	T											T	T											T	T													S	S	T	T						S	S	S			.
Template Predicted Secondary structure							.																																																																									.
Template SS confidence
		21	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	E	P	G	V	M	S	A	D	R	L	E	G	V	M	R	L	T	P	A	L	G	Q	Q	K	L	Y	V	L	V	F	T	T	E	K	D	L	Q	Q	T	T	Q	L	L	D	P	A	K	A	Y	A	K	G	V	G	N	S	I	P	D	I	P	D	P	V
Query Conservation
Alig confidence																							.																				.	.
Template Conservation																							.																				.	.
Template Sequence		V	Y	Y	E	S	S	K	P	N	E	Y	A	K	F	I	F	Y	N	Y	H	D	.	G	K	V	N	V	V	A	N	L	F	G	R	T	P	N	L	S	N	E	.	.	I	K	K	R	F	E	E	D	F	M	N	R	G	F	R	R	E	N	I	L	D	I	S
Template Known Secondary structure							S	S	T	T	T											T	.	T											S	S	S	S					.	.											T	T	T			G	G	G				T	T
Template Predicted Secondary structure																							.																				.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions