Job Description P10442 Confidence 100.00% Date Thu Jan 5 11:32:18 GMT 2012 Rank 5 Aligned Residues 187 % Identity 29% Template d1uaxa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Ribonuclease H Resolution 2.00

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.
Predicted Secondary structure																																	.	.	.	.																																								.	.
Query SS confidence																																	.	.	.	.																																								.	.
Query Sequence		L	V	A	G	V	D	E	V	G	R	G	P	L	V	G	A	V	V	T	A	A	V	I	L	D	P	A	R	P	I	A	.	.	.	.	G	L	N	D	S	K	K	L	S	E	K	R	R	L	A	L	Y	E	E	I	K	E	K	A	L	S	W	S	L	G	R	A	E	P	H	E	I	D	E	.	.	L	N	I	L
Query Conservation																																	.	.	.	.																																								.	.
Alig confidence																																	.	.	.	.																																								.	.
Template Conservation
Template Sequence		K	V	A	G	V	D	E	A	G	R	G	P	V	I	G	P	L	V	I	G	V	A	V	I	D	E	K	N	I	E	R	L	R	D	I	G	V	K	D	S	K	Q	L	T	P	G	Q	R	E	K	L	F	S	K	L	I	D	I	L	D	D	Y	Y	V	L	L	V	T	P	K	E	I	D	E	R	H	H	S	M	N
Template Known Secondary structure											S	S		S	B	S											G	G	G								T	G	G	G	S	T	T	S																S	S														T		S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.													.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	T	M	L	A	M	Q	R	A	V	A	G	L	H	I	A	P	E	Y	V	L	I	D	G	N	R	C	P	.	.	.	.	.	.	.	.	.	.	.	.	K	L	P	M	P	A	M	A	V	V	K	G	D	S	R	V	P	E	I	S	A	A	S	I	L	A	K	V	T	R	D	A	E	M	A	A	L	D	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	E	A	E	K	F	V	V	A	L	N	S	L	R	I	K	P	Q	K	I	Y	V	D	S	A	D	V	D	P	K	R	F	A	S	L	I	K	A	G	L	K	Y	E	A	T	V	I	A	E	H	K	A	D	A	K	Y	E	I	V	S	A	A	S	I	I	A	K	V	T	R	D	R	E	I	E	K	L	K	Q
Template Known Secondary structure														T		S	S			S							T	T	S														S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		V	F	P	Q	Y	G	F	A	Q	H	K	G	Y	P	T	A	F	H	L	E	K	L	A	E	.	.	H	G	A	T	E	H	H	R	R	S	F	G	P	V	K	R	A	L	G	L	A
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		K	Y	G	E	F	G	S	G	Y	P	S	D	P	R	T	K	E	W	L	E	E	Y	Y	K	Q	Y	G	D	F	P	P	I	V	R	R	T	W	E	T	A	R	K	I	E	E	R	F
Template Known Secondary structure							T	T	S		T	T																S	S			T	T	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions