Job Description P10442 Confidence 100.00% Date Thu Jan 5 11:32:18 GMT 2012 Rank 8 Aligned Residues 184 % Identity 26% Template d1ekea_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Ribonuclease H Resolution 2.00

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.
Predicted Secondary structure																														.																																													.	.	.	.
Query SS confidence																														.																																													.	.	.	.
Query Sequence		Q	L	V	A	G	V	D	E	V	G	R	G	P	L	V	G	A	V	V	T	A	A	V	I	L	D	P	A	.	R	P	I	A	G	L	N	D	S	K	K	L	S	E	K	R	R	L	A	L	Y	E	E	I	K	E	K	A	L	S	W	S	L	G	R	A	E	P	H	E	I	D	E	L	.	.	.	.	N	I	L
Query Conservation																														.																																													.	.	.	.
Alig confidence																														.																													.																.	.	.	.
Template Conservation																																																											.
Template Sequence		X	I	I	I	G	I	D	E	A	G	R	G	P	V	L	G	P	X	V	V	C	A	F	A	I	E	K	E	R	E	E	E	L	K	K	L	G	V	K	E	L	T	K	N	K	R	A	Y	L	K	K	L	L	E	N	L	G	.	Y	V	E	K	R	I	L	E	A	E	E	I	N	Q	L	X	N	S	I	N	L	N
Template Known Secondary structure												S	S		S	B	S											G	G	G						T	T	T																				S	.																T	T	T	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.																				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	T	M	L	A	M	Q	R	A	V	A	G	L	.	.	.	.	.	.	H	I	A	P	E	Y	V	L	I	D	G	N	R	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	L	P	M	P	A	M	A	V	V	K	G	D	S	R	V	P	E	I	S	A	A	S	I	L	A
Query Conservation																.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	E	I	N	A	F	S	K	V	A	K	N	L	I	E	K	L	N	I	R	D	D	E	I	E	I	Y	I	D	A	C	S	T	N	T	K	K	F	E	D	S	F	K	D	K	I	E	D	I	I	K	E	R	N	L	N	I	K	I	I	A	E	H	K	A	D	A	K	Y	P	V	V	S	A	A	S	I	I	A
Template Known Secondary structure																			T	T			S	S										S	S																		T	T	T	T									T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		K	V	T	R	D	A	E	M	A	A	L	D	I	V	F	P	Q	Y	G	F	A	Q	H	K	G	Y	P	T	A	F	H	L	E	K	L	A	E	.	.	.	.	.	.	H	G	A	T	E	H	H	R	R	S	F	G	P	V	K	R	A	L	G	L	A	S
Query Conservation																																							.	.	.	.	.	.
Alig confidence																					.	.	.	.															.	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		K	A	E	R	D	E	I	I	D	Y	Y	K	K	I	Y	G	D	I	G	.	.	.	.	S	G	Y	P	S	D	P	K	T	I	K	F	L	E	D	Y	F	K	K	H	K	K	L	P	D	I	A	R	T	H	W	K	T	C	K	R	I	L	D	K	S	K
Template Known Secondary structure																T	S			T	.	.	.	.	T	S	S	T	T	S															S	S			T	T	B		T	T	S										T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions