Job Description P10442 Confidence 100.00% Date Thu Jan 5 11:32:18 GMT 2012 Rank 3 Aligned Residues 194 % Identity 27% Template c3kioA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease h2 subunit a; PDBTitle: mouse rnase h2 complex Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.																										.	.
Query SS confidence																																									.	.																										.	.
Query Sequence		I	E	F	V	Y	P	H	T	Q	L	V	A	G	V	D	E	V	G	R	G	P	L	V	G	A	V	V	T	A	A	V	I	L	D	P	A	R	P	I	.	.	A	G	L	N	D	S	K	K	L	S	E	K	R	R	L	A	L	Y	E	E	I	K	E	K	A	.	.	L	S	W	S	L	G	R	A	E	P	H	E
Query Conservation																																									.	.																										.	.
Alig confidence																																									.	.																										.	.
Template Conservation
Template Sequence		V	P	A	V	C	L	K	E	P	C	V	L	G	V	D	E	A	G	R	G	P	V	L	G	P	X	V	Y	A	I	C	Y	C	P	L	S	R	L	A	D	L	E	A	L	K	V	A	D	T	L	T	E	N	E	R	E	R	L	F	A	K	X	E	E	D	G	D	F	V	G	W	A	L	D	V	L	S	P	N	L
Template Known Secondary structure				T					S											S	S		S	B	S											G	G	G	G	G	G						S																			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		78	.								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	.	.	.	.	.	.	.	E	L	N	I	L	H	A	T	M	L	A	M	Q	R	A	V	A	G	L	.	.	.	H	I	A	P	E	Y	V	L	I	D	G	N	R	C	P	K	L	.	.	.	.	.	.	.	.	.	.	P	M	P	A	M	A	V	V	K	G	D	S	R	V	P	E	I	S	A	A	S	I
Query Conservation				.	.	.	.	.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.																				.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	T	S	X	L	G	R	V	K	Y	N	L	N	S	L	S	H	D	T	A	A	G	L	I	Q	Y	A	L	D	Q	N	V	N	V	T	Q	V	F	V	D	T	V	G	X	P	E	T	Y	Q	A	R	L	Q	Q	H	F	P	G	I	E	V	T	V	K	A	K	A	D	S	L	F	P	V	V	S	A	A	S	I
Template Known Secondary structure							T	S	S	S																						T	T											S	S												S	S	T	T	S						T	T	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																											.	.															.	.	.	.	.	.
Query SS confidence																											.	.															.	.	.	.	.	.
Query Sequence		L	A	K	V	T	R	D	A	E	M	A	A	L	D	I	V	F	P	Q	Y	G	F	A	Q	H	.	.	K	G	Y	P	T	A	F	H	L	E	K	L	A	E	.	.	.	.	.	.	H	G	A	T	E	H	H	R	R	S	F	G	P	V	K	R	A	L	G
Query Conservation																											.	.															.	.	.	.	.	.
Alig confidence																											.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	K	V	A	R	D	K	A	V	K	N	W	Q	F	V	E	N	L	Q	D	L	D	S	D	Y	G	S	G	Y	P	N	D	P	K	T	K	A	W	L	R	K	H	V	D	P	V	F	G	F	P	Q	F	V	R	F	S	W	S	T	A	Q	A	I	L	E
Template Known Secondary structure																					T	T							S	S	S	T	T	S									T	T		B	T	T	T	B	S		T	T	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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