Job Description P10442 Confidence 5.91% Date Thu Jan 5 11:32:18 GMT 2012 Rank 57 Aligned Residues 56 % Identity 27% Template c2p2uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:host-nuclease inhibitor protein gam, putative; PDBTitle: crystal structure of putative host-nuclease inhibitor2 protein gam from desulfovibrio vulgaris Resolution 2.75 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		A	K	V	T	R	D	A	E	M	A	A	L	D	I	V	F	P	Q	Y	G	F	A	Q	H	K	G	Y	P	T	.	.	.	.	.	.	A	F	H	L	E	K	L	A	E	H	G	A	T	E	H	H	R	R	S	F	G	P	V	K	R	A	L
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	L	N	K	T	E	X	F	K	S	L	D	L	G	F	G	T	I	G	F	R	L	S	T	Q	I	V	Q	X	S	K	I	T	K	D	X	T	L	E	R	L	R	Q	F	G	I	S	E	G	I	R	I	K	E	D	V	N	K	E	A	X
Template Known Secondary structure					T									B		S	S		B													T	T													T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions