 |
Job Description | P37197 | Confidence | 98.59% | Date | Thu Jan 5 11:55:03 GMT 2012 |
Rank | 27 | Aligned Residues | 107 |
% Identity | 15% | Template | d3c2ca_ |
SCOP info | Cytochrome c
| Cytochrome c
| monodomain cytochrome c
|
Resolution | 1.68 |
|
 |
  |   |
339 | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | K | G | Y | Q | L | F | K | D | N | K | C | A | T | C | H | G | G | I | I | L | G | G | R | S | F | E | P | L | G | L | K | K | D | F | N | F | G | E | I | T | A | A | D | I | G | R | M | N | V | T | K | E | E | R | D | K | L | R | Q | K | V | P | G | L | R | N | V | A | L | T | A | P | Y | F | H | R | G | D |
Query Conservation |   |
|   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
| . | . |   |   |
|   |   |
|
|   | . | . | . |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
A | A | A | G | E | K | V | S | . |
. |
K | K | C | L | A | C | H | T | . |
. |
. |
F | D | Q | G | G | A | N | K | V | G | P | N | L | F | G | V | F | E | N | T | A | A | H | K | D | N | Y | A | Y | S | E | S | Y | T | E | M | K | A | . |
. |
. |
K | G | L | T | W | T | E | A | N | L | A | A | Y | V | K | N | P | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | G | . | . | G | G | G | T | T | T |
|
| . | . | . |
| S | T | T |
|
|
| S | S | S |
|
|
| T | T |
| T | T | S | B | S | S |
|
| T | T | S |
|
|
|  |  |  |  |  |  |  |  | . | . | . | T | T |
| B |
|
|  |  |  |  |  |  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | |
|
. | . | . | . | . | . | . | . | |
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | |
. | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | T | L | D | G | A | V | K | L | M | L | R | Y | Q | V | G | K | E | . |
L | P | Q | E | D | V | D | D | I | V | A | F | L | H | S | L |
Query Conservation |   |
  |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   | . |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
A | F | V | L | E | K | S | G | D | P | K | A | K | S | K | M | T | F | K | L | T | K | D | D | E | I | E | N | V | I | A | Y | L | K | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| T | T |
|
|
| S |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|