 |
Job Description | P37197 | Confidence | 97.99% | Date | Thu Jan 5 11:55:03 GMT 2012 |
Rank | 50 | Aligned Residues | 71 |
% Identity | 20% | Template | d351ca_ |
SCOP info | Cytochrome c
| Cytochrome c
| monodomain cytochrome c
|
Resolution | 1.60 |
|
 |
  |   |
341 | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | Y | Q | L | F | K | D | N | K | C | A | T | C | H | G | G | I | I | L | G | G | R | S | F | E | P | L | G | L | K | K | D | F | N | F | G | E | I | T | A | A | D | I | G | R | M | N | V | T | K | E | E | R | D | K | L | R | Q | K | V | P | G | L | R | N | V | A | L | T | A | P | Y | F | H | R | G | D | V | P |
Query Conservation |   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
Template Sequence |   |
D | P | E | V | L | F | K | N | K | G | C | V | A | C | H | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | D | T | K | M | V | G | P | A | Y | K | D | V | A | A | K | F | A | . |
. |
. |
. |
G | Q | A | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | T | G | G | G | T | B |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S | S | B | S | S | S |
|
|  |  |  |  |  |  |  |  | T | . | . | . | . | T |
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
. | . | . | . |
  |
  |   |
421 | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | D | G | A | V | K | L | M | L | R | Y | Q | V | G | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | P | Q | E | D | V | D | D | I | V | A | F | L | H | S | L |
Query Conservation |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |
|
|
Template Sequence |   |
A | E | A | E | L | A | Q | R | I | K | N | G | S | Q | G | V | W | G | P | I | P | M | P | P | N | A | V | S | D | D | E | A | Q | T | L | A | K | W | V | L | S | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| B |
| S | S | S | S | S | S |
| B |
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|