 |
Job Description | P37197 | Confidence | 97.76% | Date | Thu Jan 5 11:55:03 GMT 2012 |
Rank | 59 | Aligned Residues | 69 |
% Identity | 25% | Template | d1wvec1 |
SCOP info | Cytochrome c
| Cytochrome c
| monodomain cytochrome c
|
Resolution | 1.85 |
|
 |
  |   |
337 | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | Q | K | K | G | Y | Q | L | F | K | D | N | K | C | A | T | C | H | G | G | I | I | L | G | G | R | S | F | E | P | L | G | L | K | K | D | F | N | F | G | E | I | T | A | A | D | I | G | R | M | N | V | T | K | E | E | R | D | K | L | R | Q | K | V | P | G | L | R | N | V | A | L | T | A | P | Y | F | H | R |
Query Conservation |   |
  |   |
|   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|   |   |   |
|   |   |
|
|   |   | . |   |
|
|   |
|
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |   |   |   |   |   |   |   | . | . | . |
Template Sequence |   |
S | Q | W | G | S | G | K | N | L | Y | D | K | . |
V | C | G | H | C | H | K | P | E | V | G | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | V | L | E | G | R | G | L | P | E | A | Y | . |
. |
. |
Template Known Secondary structure |   |
|
| S | S | S |  |  |  |  |  |  |  | . | T | T |  |  |  |  | S | T | T | T |
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S |
|
|
| T | T | S |
|
|
|  |  |  | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
602 | . | . | . | . | . | . | . | 610 | . | . | . | |
. | . | . | . | . | . | 620 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 630 | . | . | . | . | . | . | . | . | |
|
|
  |
  |   |
417 | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | |
|
|
. | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | V | P | T | L | D | G | A | V | K | L | M | L | R | Y | Q | V | G | K | . |
. |
. |
E | L | P | Q | E | D | V | D | D | I | V | A | F | L | H | S | L |
Query Conservation |   |
|   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |
|
|
|   |
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
I | K | D | I | V | R | N | G | F | R | A | M | P | A | F | P | A | S | Y | V | D | D | E | S | L | T | Q | V | A | E | Y | L | S | S | L |
Template Known Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |  |
| B | T | T | B |
|
|
|
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
639 | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|