Return to main results Retrieve Phyre Job Id

Job DescriptionP37197
Confidence98.88%DateThu Jan 5 11:55:03 GMT 2012
Rank19Aligned Residues93
% Identity17%Templated1wejf_
SCOP infoCytochrome c Cytochrome c monodomain cytochrome c
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   339340.........350.........360.........370.........380.........390.........400.........410........
Predicted Secondary structure 


































































Query SS confidence 















































































Query Sequence  QKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGD
Query Conservation 
 

  

    

 

 
   
   
   
             
 
    
    
   








  



 


 
Alig confidence 









.






........................





































Template Conservation     

 

  . 
  

 ........................  
 
    

 
                         
Template Sequence  VEKGKKIFVQ. KCAQCHT. . . . . . . . . . . . . . . . . . . . . . . . VEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGI
Template Known Secondary structure  .TTTT

........................
STT



SS


TT
TT
BTT

TT






Template Predicted Secondary structure  .




........................
































Template SS confidence 















































































   3......10.. ....... 20.........30.........40.........50.......
 
   419420.........430....... ..440.........450......
Predicted Secondary structure 








.........




Query SS confidence 


















. . . . . . . . .


















Query Sequence  VPTLDGAVKLMLRYQVGKE. . . . . . . . . LPQEDVDDIVAFLHSLNGV
Query Conservation    

 


           .........

  
  





 


  
Alig confidence 


















.........


















Template Conservation        
           
   

    

  
  





 

  
Template Sequence  TWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE
Template Known Secondary structure  B
S
STT









TT
Template Predicted Secondary structure 






















Template SS confidence 














































   58.60.........70.........80.........90.........100....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions