Job Description P37197 Confidence 96.84% Date Thu Jan 5 11:55:03 GMT 2012 Rank 99 Aligned Residues 114 % Identity 21% Template d1ppjd1 SCOP info Cytochrome c Cytochrome c Cytochrome bc1 domain Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																															.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	Q	K	K	G	Y	Q	L	F	K	D	N	K	C	A	T	C	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	I	L	G	G	R	S	F	E	P	L	G	L	K	K	D	F	N	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		T	S	I	R	R	G	F	Q	V	Y	K	Q	V	.	C	S	S	C	H	S	M	D	Y	V	A	Y	R	H	L	V	G	V	C	Y	T	E	D	E	A	K	A	L	A	E	E	V	E	V	Q	D	G	P	N	E	D	G	E	M	F	M	R	P	G	K	L	S	D	Y	F	P	K	P	Y	P	N	P	E	A	A	R
Template Known Secondary structure														T	.	G	G	G	T				T	T		B					B	T	T	T	B										T	T	S								T	T	S									T	T	S	B				S	S	S	S
Template Predicted Secondary structure															.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
				376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.						.	.	.	.	400	.	.	.	.	.	.	.	.	.	410					.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.
Predicted Secondary structure		.	.																		.				.	.	.	.	.																.	.	.	.																														.
Query SS confidence		.	.																		.				.	.	.	.	.																.	.	.	.																														.
Query Sequence		.	.	F	G	E	I	T	A	A	D	I	G	R	M	N	V	T	K	E	.	E	R	D	.	.	.	.	.	K	L	R	Q	K	V	P	G	L	R	N	V	A	L	T	.	.	.	.	A	P	Y	F	H	R	G	D	V	P	T	L	D	G	A	V	K	L	M	L	R	Y	Q	V	G	K	E	L	P	.	Q	E	D
Query Conservation		.	.																		.				.	.	.	.	.																.	.	.	.																														.
Alig confidence		.	.																		.				.	.	.	.	.																.	.	.	.																														.
Template Conservation
Template Sequence		A	A	N	N	G	A	L	P	P	D	L	S	Y	I	V	R	A	R	H	G	G	E	D	Y	V	F	S	L	L	T	G	Y	C	E	P	P	T	G	V	S	L	R	E	G	L	Y	F	N	P	Y	F	P	G	Q	A	I	G	M	A	P	P	I	Y	N	E	V	L	E	F	D	D	G	T	P	A	T	M	S	Q	V
Template Known Secondary structure			T	T	T	T							T	T	T	T	T	S	S	T	T										T							T	T					T	T					T	T	S	T	T	S			S	S						T	T	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		443	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	D	I	V	A	F	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	D	V	C	T	F	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions