 |
Job Description | P37197 | Confidence | 96.97% | Date | Thu Jan 5 11:55:03 GMT 2012 |
Rank | 94 | Aligned Residues | 69 |
% Identity | 17% | Template | d1fcdc1 |
SCOP info | Cytochrome c
| Cytochrome c
| Two-domain cytochrome c
|
Resolution | 2.53 |
|
 |
  |   |
341 | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | Y | Q | L | F | K | D | N | K | C | A | T | C | H | G | G | I | I | L | G | G | R | S | F | E | P | L | G | L | K | K | D | F | N | F | G | E | I | T | A | A | D | I | G | R | M | N | V | T | K | E | E | R | D | K | L | R | Q | K | V | P | G | L | R | N | V | A | L | T | A | P | Y | F | H | R | G | D | V | P |
Query Conservation |   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   | . | . |   |   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
T | A | E | M | L | T | . |
. |
N | N | C | A | G | C | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | T | H | G | N | S | V | G | P | A | S | P | S | I | A | Q | M | D | P | M |
Template Known Secondary structure |   |
|  |  |  |  |  | . | . |  | T | T | T | T | T | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| G | G | G |
|
|
| S | S | S | S |
|
|
| S | S |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | |
|
. | 10 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |
  |
  |   |
421 | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | D | G | A | V | K | L | M | L | R | Y | Q | V | G | . |
. |
. |
. |
. |
. |
. |
. |
K | E | L | P | Q | E | D | V | D | D | I | V | A | F | L | H | S | L | N | G | V |
Query Conservation |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
Template Sequence |   |
V | F | V | E | V | M | E | G | F | K | S | G | E | I | A | S | T | I | M | G | R | I | A | K | G | Y | S | T | A | D | F | E | K | M | A | G | Y | F | K | Q | Q | T | Y | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
| S |
|
| S | S |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|