Job Description P37197 Confidence 100.00% Date Thu Jan 5 11:55:03 GMT 2012 Rank 6 Aligned Residues 280 % Identity 36% Template c3l4oB_ PDB info PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:methylamine utilization protein maug; PDBTitle: crystal structure of the maug/pre-methylamine dehydrogenase complex2 after treatment with hydrogen peroxide Resolution 2.05 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	Q	K	V	A	L	G	F	A	L	Y	H	D	P	R	L	S	A	D	S	T	I	S	C	A	H	C	H	A	L	N	A	G	G	V	D	G	R	K	T	S	I	G	V	.	.	.	.	.	.	.	G	G	A	V	G	P	I	N	A	P	T	V	F	N	S	V	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	A	L	A	A	L	G	A	Q	L	F	V	D	P	A	L	S	R	N	A	T	Q	S	C	A	T	C	H	D	P	A	R	A	F	T	D	P	R	E	G	K	A	G	L	A	V	S	V	G	D	D	G	Q	S	H	G	D	R	N	T	P	T	L	G	Y	A	A	L	V	P	A	F	H	R	D	A	N	G	K
Template Known Secondary structure														T		G	G	G	S	T	T	S								S	B	G	G	G	T	S	B					B	T	T	B	T	S	S		B		T	T	S	S		B		S	S						T	T	G	G	G	S			S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.							300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.																		.
Query SS confidence																																																										.	.	.	.	.	.																		.
Query Sequence		F	N	V	E	Q	F	W	D	G	R	A	A	T	L	Q	D	Q	A	G	G	P	P	L	N	P	I	E	M	A	S	K	S	W	D	E	I	I	A	K	L	E	K	D	P	Q	L	K	T	Q	F	L	E	V	Y	P	Q	.	.	.	.	.	.	G	F	S	G	E	N	I	T	D	A	I	A	E	F	E	K	T	.
Query Conservation																																																										.	.	.	.	.	.																		.
Alig confidence																																																										.	.	.	.	.	.																		.
Template Conservation
Template Sequence		Y	K	G	G	Q	F	W	D	G	R	A	D	D	L	K	Q	Q	A	G	Q	P	M	L	N	P	V	E	M	A	M	P	D	R	A	A	V	A	A	R	L	R	D	D	P	A	Y	R	T	G	F	E	A	L	F	G	K	G	V	L	D	D	P	E	R	A	F	D	A	A	A	E	A	L	A	A	Y	Q	A	T	G
Template Known Secondary structure						B	S	T	T			B	S	S												T	T	T	T														T														T	T	G	G	G	S																	T	S	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
			317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.									.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.	.
Predicted Secondary structure		.																																										.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence		.																																										.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		.	L	I	T	P	D	S	P	F	D	K	W	L	R	G	D	E	N	A	L	T	A	Q	Q	K	K	G	Y	Q	L	F	K	D	N	K	C	A	T	C	H	G	G	.	.	.	.	.	.	.	.	I	I	L	G	G	R	S	F	E	P	L	G	L	K	K	D	F	.	.	.	.	.	N	F	G	E	I	T	A	A
Query Conservation		.																																										.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence		.																.																										.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																		.
Template Sequence		E	F	S	P	F	D	S	K	Y	D	R	V	M	R	G	E	.	E	K	F	T	P	L	E	E	F	G	Y	T	V	F	I	T	W	N	C	R	L	C	H	M	Q	R	K	Q	G	V	A	E	R	E	T	F	T	N	F	E	Y	H	N	I	G	L	P	V	N	E	T	A	R	E	A	S	G	L	G	A	D	H	V
Template Known Secondary structure		T	T					S							T	T	S	.	S																S	G	G	G	G	T	S	S	S		S	S	S			S	S			S				B			B														T			T	T
Template Predicted Secondary structure																		.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		383	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure											.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	G	R	M	N	V	T	K	.	.	E	E	R	D	K	L	R	Q	K	V	P	G	L	R	N	V	A	L	T	A	P	Y	F	H	R	G	D	V	P	T	L	D	G	A	V	K	L	M	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	H	G	L	L	A	R	P	G	I	E	D	P	A	Q	S	G	R	F	K	V	P	S	L	R	N	V	A	V	T	G	P	Y	M	H	N	G	V	F	T	D	L	R	T	A	I	L	F	Y	N	K	Y	T	S	R	R	P	E	A	K	I	N	P	E	T	G	A	P	W	G	E	P	E	V	A	R	N	L	S	L
Template Known Secondary structure				B	G	G	G	S	T	T				G	G	G	T	T	B							T	T	G	G	G	S		S	B	S	T	T			B	S	S								G	G	G	G	T			S	G	G	G	G			T	T	T	T							S	S		S	S	B
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
				432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.
Predicted Secondary structure		.	.																									.
Query SS confidence		.	.																									.
Query Sequence		.	.	Y	Q	V	G	K	E	L	P	Q	E	D	V	D	D	I	V	A	F	L	H	S	L	N	G	.	V	Y	T	P	Y	M	Q	D
Query Conservation		.	.																									.
Alig confidence		.	.																									.
Template Conservation
Template Sequence		A	E	L	Q	S	G	L	M	L	D	D	G	R	V	D	A	L	V	A	F	L	E	T	L	T	D	R	R	Y	E	P	L	L	E	E
Template Known Secondary structure							S																	T	T	S		G	G	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions