 |
Job Description | P37197 | Confidence | 20.20% | Date | Thu Jan 5 11:55:03 GMT 2012 |
Rank | 197 | Aligned Residues | 61 |
% Identity | 16% | Template | c3fkkA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; |
PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase
|
Resolution | 2.10 Å |
|
 |
  |   |
401 | . | . | . | . | . | . | |
|
. | . | 410 | . | . | . | . | . | . | . | . | . | |
|
420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | G | L | R | N | V | . |
. |
A | L | T | A | P | Y | F | H | R | G | D | V | . |
. |
P | T | L | D | G | A | V | K | L | M | L | R | Y | Q | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | E | L | P | Q | E | D | V | D | D | I | V | A | F | L | H | S | L | N | G | V | Y | T | P | Y | M |
Query Conservation |   |
|
|
|
|
|
|
| . | . |   |   |
|
|
|
|   |
|
|
|   |   | . | . |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
T | P | R | H | R | G | I | F | P | V | V | P | T | T | F | A | D | T | G | D | L | D | L | A | S | Q | K | R | A | V | D | F | M | I | D | A | G | S | D | G | L | C | I | L | A | N | F | S | E | Q | F | A | I | T | D | D | E | R | D | V | L | T | R | T | I | L | E | H | V | A | G | R | V | P | V | I |
Template Known Secondary structure |   |
|
| S |
|
|  |  |
|
| B |
|
|
|
| B |
| T | T | S | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  | S | S | G | G | G | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|