Job Description P37197 Confidence 97.82% Date Thu Jan 5 11:55:03 GMT 2012 Rank 56 Aligned Residues 90 % Identity 20% Template c3dr0B_ PDB info PDB header:electron transport Chain: B: PDB Molecule:cytochrome c6; PDBTitle: structure of reduced cytochrome c6 from synechococcus sp.2 pcc 7002 Resolution 1.23 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	K	K	G	Y	Q	L	F	K	D	N	K	C	A	T	C	H	G	G	I	I	L	G	G	R	S	F	E	P	L	G	L	K	K	D	F	N	F	G	E	I	T	A	A	D	I	G	R	M	N	V	T	K	E	E	R	D	K	L	R	Q	K	V	P	G	L	R	N	V	A	L	T	A	P	Y	F	H	R
Query Conservation
Alig confidence														.							.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.							.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	A	A	A	G	A	Q	V	F	A	A	.	N	C	A	A	C	H	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	G	N	N	A	V	M	P	T	K	T	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	L	K	T	Y	L	A	G	Y	K	D	G	S	K
Template Known Secondary structure														.		T					.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G			S	S	S	T	T			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	T	T	T	S	S
Template Predicted Secondary structure														.							.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.														.	20	.	.	.	.	.	.	.	.	.	30	.	.																			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		G	D	V	P	T	L	D	G	A	V	K	L	M	L	.	.	R	Y	Q	V	G	K	E	L	P	Q	E	D	V	D	D	I	V	A	F	L	H	S	L	N	G	V	Y	T
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		S	L	E	E	A	V	A	Y	Q	V	T	N	G	Q	G	A	M	P	A	F	G	G	R	L	S	D	A	D	I	A	N	V	A	A	Y	I	A	D	Q	A	E	N	N	K
Template Known Secondary structure															B	T	T	B				T	T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions