Job Description P37197 Confidence 97.48% Date Thu Jan 5 11:55:03 GMT 2012 Rank 84 Aligned Residues 72 % Identity 26% Template c2v07A_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:cytochrome c6; PDBTitle: structure of the arabidopsis thaliana cytochrome c6a v52q2 variant Resolution 1.6 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	G	Y	Q	L	F	K	D	N	K	C	A	T	C	H	G	G	I	I	L	G	G	R	S	F	E	P	L	G	L	K	K	D	F	N	F	G	E	I	T	A	A	D	I	G	R	M	N	V	T	K	E	E	R	D	K	L	R	Q	K	V	P	G	L	R	N	V	A	L	T	A	P	Y	F	H	R	G	D	V
Query Conservation
Alig confidence											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	G	A	T	L	F	N	R	.	A	C	I	A	C	H	D	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	I	Q	P	G	A	T	L	F	T	K	D	L	E	R	N	G	V
Template Known Secondary structure											.		T	T	T	T	S	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	T	T			S	S							T	T
Template Predicted Secondary structure											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.																																										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
		420	.	.	.	.	.	.	.	.	.	430																		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	L	D	G	A	V	K	L	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	Q	V	G	K	E	L	P	Q	E	D	V	D	D	I	V	A	F	L	H	S	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	E	E	E	I	Y	R	Q	T	Y	F	G	K	G	R	M	P	G	F	G	E	K	C	T	P	R	G	Q	C	T	F	G	P	R	L	Q	D	E	E	I	K	L	L	A	E	F	V	K	F	Q
Template Known Secondary structure			S												B	T	T	B		B		B	T	T			S	G	G	G	B		S	S			B
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions