Job Description P37197 Confidence 77.06% Date Thu Jan 5 11:55:03 GMT 2012 Rank 128 Aligned Residues 114 % Identity 13% Template c2jblC_ PDB info PDB header:electron transport Chain: C: PDB Molecule:photosynthetic reaction center cytochrome c PDBTitle: photosynthetic reaction center from blastochloris viridis Resolution 2.4 Å

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		58	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		G	C	D	Y	C	H	.	.	T	P	S	A	E	L	P	A	Y	Y	Y	I	P	G	A	K	Q	L	M	D	Y	D	I	K	L	G	Y	K	S	F	N	L	E	A	V	R	A	A	L	L	A	D	K	P	V	S	Q	S	D	L	N	K	I	E	W	V	M	Q	Y	E	T	M	P	P	T	R	Y	T	A	L	H	W
Query Conservation								.	.
Alig confidence								.	.													.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.
Template Sequence		T	C	Y	T	C	H	R	G	T	P	L	P	P	Y	V	R	Y	L	E	P	.	.	.	.	.	.	.	.	.	.	.	.	T	L	P	L	N	N	R	E	T	P	T	H	V	E	R	V	E	T	R	.	.	.	S	G	Y	V	V	R	L	A	K	Y	T	A	Y	S	A	L	N	Y	D	P	F	.	.	.	.	.
Template Known Secondary structure								T	T	S	S	S		S	S		B		S	S		.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S	T	T	S				T	T	T	S	T	T		G	.	.	.	G	G									T	T	T									.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150													.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		A	G	K	V	S	D	E	E	R	A	E	I	L	A	W	I	A	K	Q	R	A	E	Y	Y	A	S	N	D	T	A	P	E	H	R	N	E	P	V	Q	P	.	.	.	.	.	.	I	P	Q	K	L	P	T	D	A	Q	K	V	A	L	G	F	A	L	Y	H	D	P	R	L	S	A	D	S	T	I	S	C	A	H
Query Conservation																																										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																												.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	F	L	A	N	D	K	R	Q	V	R	V	V	P	Q	T	A	L	P	L	V	G	V	S	R	G	K	E	R	R	P	L	S	D	A	Y	A	T	F	A	L	M	M	S	I	S	D	S	L	G	T	N	.	.	.	.	C	T	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S		S		S					S		S	S	S	S			T	T	T	S	S	G	G	G	S			T																		T			.	.	.	.	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template SS confidence
																						191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.
		210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	A	L	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	H	N	A	Q	T
Template Known Secondary structure		T	B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions