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Job DescriptionP37197
Confidence99.41%DateThu Jan 5 11:55:03 GMT 2012
Rank17Aligned Residues179
% Identity16%Templatec2c1dC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:soxa; PDBTitle: crystal structure of soxxa from p. pantotrophus
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.........220.........230.........240......... 250.........260...
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Query Sequence  KVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVFNSVFNVEQF. . WDGRAATLQDQAGG
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Template Sequence  FVDRGLDKWNAAM. . GVNGESCASCHQ. . GPE. . . . . . . . . . . . . . . . . . . . SMAGLRAVMPRVDEHTGKLMIMEDYVNA
Template Known Secondary structure  S

..STTS


..SGG....................GGTTTGGG
S
TTT


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   87..90......... 100.........110. ... .....120.........130.........140..
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  PPLNPIEMASKSWDEIIAKLEKDPQLKTQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGY
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Template Sequence  CVTER. . MGLEK. . . . . . . . . . . . . . . . . . . . . . . . WGVTSDNMKDMLSLISLQ. SRGMAVNVKIDGPAA. . . PYWEHGK
Template Known Secondary structure  T..T



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TTST.TTTSB




SGGG...
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   143.... ..150.. .......160.........170 .........180..... ....190..
 
   344..... 350.........360.........370.........380.........390.........400.........410. .. .
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Query Sequence  QLFKDN. . . . . . KCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTA. . PY. F
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Template Sequence  EIYYTRYGQLEMSCANCHE. . . . . . . . . . . . . . . . . . . . . . . . . DNAGN. . . . . . . . . . . MIRADHLSQGQINGFPTYRL
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BTTTTB
T.........................TSTTS...........TT





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   193......200.........210. ..... ...220.........230......
 
   415....420........ .430.........440.........450....
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Query Sequence  HRGDVPTLDGAVKL. MLRYQVGKELPQEDVDDIVAFLHSLN
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Template Sequence  KDSGMVTAQHRFVGVRDTRAETFKAGSDDFKALELYVASRG
Template Known Secondary structure  TTT


GGGTS



TT
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   237..240.........250.........260.........270.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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