Job Description P37197 Confidence 100.00% Date Thu Jan 5 11:55:03 GMT 2012 Rank 8 Aligned Residues 270 % Identity 43% Template c1zzhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c peroxidase; PDBTitle: structure of the fully oxidized di-heme cytochrome c2 peroxidase from r. capsulatus Resolution 2.70 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	P	I	P	Q	K	L	P	T	D	A	Q	K	V	A	L	G	F	A	L	Y	H	D	P	R	L	S	A	D	S	T	I	S	C	A	H	C	H	A	L	N	A	G	G	V	D	G	R	K	T	S	I	G	V	G	G	A	V	G	P	I	N	A	P	T	V	F	N	S	V	F	N	V	E	Q	F	W	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	V	I	P	M	Q	A	P	V	T	R	D	K	I	D	L	G	A	M	L	F	F	D	P	R	M	S	K	S	G	V	F	S	C	Q	S	C	H	N	V	G	L	G	G	V	D	G	L	E	T	S	I	G	H	G	W	Q	K	G	P	R	N	A	P	T	A	L	N	A	V	F	N	V	A	Q	F	W	D	G
Template Known Secondary structure		B					S	S				T	T													G	G	G	S	T	T	S	S							S	B	T	T	T	T	T	B			S	S		B				T	T			S	S	B						T	T	G	G	G		S				S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		R	A	A	T	L	Q	D	Q	A	G	G	P	P	L	N	P	I	E	M	A	S	K	S	W	D	E	I	I	A	K	L	E	K	D	P	Q	L	K	T	Q	F	L	E	V	Y	P	.	.	.	Q	G	F	S	G	E	N	I	T	D	A	I	A	E	F	E	K	T	L	I	T	P	D	S	P	F	D	K	W	L	R
Query Conservation																																																.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	P	D	L	A	A	Q	A	M	N	N	.	.	.	.	.	.	.	.	.	.	T	P	E	N	L	V	A	T	V	Q	S	M	P	G	Y	V	E	A	F	A	K	A	F	P	G	Q	K	D	P	I	S	F	D	N	F	A	L	A	V	E	A	F	E	A	T	L	I	T	P	N	S	K	F	D	Q	W	L	M
Template Known Secondary structure													S	.	.	.	.	.	.	.	.	.	.											T												S	T	T		S	S																T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	E	N	A	L	T	A	Q	Q	K	K	G	Y	Q	L	F	K	D	N	K	C	A	T	C	H	G	G	I	I	L	G	G	R	S	F	E	P	L	G	L	K	K	D	F	N	F	G	E	I	T	A	A	D	I	G	R	M	N	V	T	K	E	E	R	D	K	L	R	Q	K	V	P	G	L	R	N	V	A	L
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	D	G	A	M	S	A	D	E	K	A	G	L	K	L	F	I	D	T	G	C	A	A	C	H	N	G	I	N	I	G	G	N	G	Y	Y	P	F	G	V	V	.	.	.	.	.	.	.	.	.	.	E	K	P	G	R	F	A	V	T	A	T	A	D	D	E	Y	V	F	R	A	G	P	L	R	N	I	A	L
Template Known Secondary structure		T		T	T	T	S															T	G	G	G	T	S		B	T	T	T	S		S				S					.	.	.	.	.	.	.	.	.	.												S	S	T	T									T	T	G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220											.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P	Y	F	H	R	G	D	V	P	T	L	D	G	A	V	K	L	M	L	R	Y	Q	V	G	K	E	L	P	Q	E	D	V	D	D	I	V	A	F	L	H	S	L	N	G	V	Y	T	P	Y	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	P	Y	F	H	S	G	K	V	W	D	L	R	E	A	V	S	V	M	A	N	S	Q	L	G	A	T	L	D	D	T	Q	V	D	Q	I	T	A	F	L	G	T	L	T	G	E	Q	P	E	V	V	H
Template Known Secondary structure		S		S	B	T	T	T	T		B												S	S	T	T	S																G	G	G
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions