Job Description P37197 Confidence 96.91% Date Thu Jan 5 11:55:03 GMT 2012 Rank 96 Aligned Residues 93 % Identity 9% Template c1w5cT_ PDB info PDB header:photosynthesis Chain: T: PDB Molecule:cytochrome c-550; PDBTitle: photosystem ii from thermosynechococcus elongatus Resolution 3.2 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	S	A	V	S	E	N	N	K	V	L	G	F	L	R	E	K	G	C	D	Y	C	H	T	P	S	A	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	Y	Y	I	P	G	A	K	Q	L	M	D	Y	D	I	K	L	G	Y	K	S	F	N	L	E	A	V	R	A	A	L	L	A	D	K	P
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																																																																																	.
Template Sequence		T	I	T	L	T	E	K	Q	Y	L	E	G	K	R	L	F	Q	Y	A	C	A	S	C	H	V	G	G	I	T	K	T	N	P	S	L	D	L	R	T	E	T	L	A	L	A	T	P	P	R	D	N	I	E	G	L	V	D	Y	M	K	N	P	T	T	Y	D	G	E	Q	E	I	A	E	V	H	P	S	L	R	.
Template Known Secondary structure																					T					G	G	G			S	S	S	T	T	S									T	S	S	S			S	S										S		B		T	T	S	S	S	B		T	T	T	S			S	T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Q	S	D	L	N	K	I	E	W	V	M	Q	Y	E	T	M	P	P	T	R	Y	T	A	L	H	W	A	G	K	V	S	D	E	E	R	A	E	I	L	A	W	I	A	K	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	I	F	P	K	M	.	.	.	.	.	.	R	N	L	T	E	K	D	L	V	A	I	A	G	H	I	L	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S	G	G	G	.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template SS confidence
																	97	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions