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Job DescriptionP37197
Confidence100.00%DateThu Jan 5 11:55:03 GMT 2012
Rank3Aligned Residues290
% Identity47%Templatec1iqcB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:di-heme peroxidase; PDBTitle: crystal structure of di-heme peroxidase from nitrosomonas europaea
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  RNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVFNSVFNVEQ
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Template Sequence  ANEPIQPIKAVTPENADMAELGKMLFFDPRLSKSGFISCNSCHNLSMGGTDNITTSIGHKWQQGPINAPTVLNSSMNLAQ
Template Known Secondary structure 


SS







SST
GGGSSSS


SBTTTTSB

SSS
B
GGG
B
SS




TTGGGSSSB
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   249250.........260.........270.........280.........290........ .300.........310.........320.......
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Query Sequence  FWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKTQFLEVYP. QGFSGENITDAIAEFEKTLITPDSPFDKW
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Template Sequence  FWDGRAKDLKEQAAGPIANPKEMAS. THEIAEKVVASMPQYRERFKKVFGSDEVTIDRITTAIAQFEETLVTPGSKFDKW
Template Known Secondary structure  STT

BSS
TTTT

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TSSSS


TT





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   81........90.........100..... ....110.........120.........130.........140.........150.........
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  LRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNV
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Template Sequence  LEGDKNALNQDELEGYNLFKGSGCVQCHNGPAVGGSSYQKMGVFKPY. . . ETKNPAAGRMDVTGNEADRNVFKVPTLRNI
Template Known Secondary structure  TT
GGGS
TGGGTS
TTTTS
SSS
SSS

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BT

GGGTT



TTT
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   160.........170.........180.........190.........200...... ...210.........220.........230......
 
   408.410.........420.........430.........440.........450.........460..
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Query Sequence  ALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQ
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Template Sequence  ELTYPYFHDGGAATLEQAVETMGRIQLNREFNKDEVSKIVAFLKTLTGDQPDFKL
Template Known Secondary structure  TTS
SBSTT

B
SS




GGG








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   237..240.........250.........260.........270.........280.........290.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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