Job Description P37197 Confidence 97.71% Date Thu Jan 5 11:55:03 GMT 2012 Rank 64 Aligned Residues 158 % Identity 22% Template c1h1oA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:cytochrome c-552; PDBTitle: acidithiobacillus ferrooxidans cytochrome c4 structure2 supports a complex-induced tuning of electron transfer Resolution 2.13 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	C	A	H	C	H	A	L	N	A	G	G	V	D	G	R	K	T	S	I	G	V	G	G	A	V	G	P	I	N	A	P	T	V	F	N	S	V	F	N	V	E	Q	F	W	D	G	R	A	A	T	L	Q	D	Q	A	G	G	P	P	L	N	P	I	E	M	A	S	K	S	W	D	E	I	I	A	K	L	E
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	C	M	V	C	H	G	M	T	G	R	D	T	L	Y	P	I	V	P	R	L	A	G	.	.	.	.	.	.	.	.	.	.	.	Q	H	K	S	Y	M	E	A	Q	L	K	A	Y	K	D	H	S	R	A	D	Q	N	G	E	I	Y	M	W	P	V	A	Q	A	L	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	T						B	T	T	B			S	S	T	T	S				T	T	.	.	.	.	.	.	.	.	.	.	.															T	T											T						T			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.					.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		K	D	P	Q	L	K	T	Q	F	L	E	V	Y	P	Q	G	F	S	G	E	N	I	T	D	A	I	A	E	F	E	K	T	L	I	T	P	D	S	P	F	D	K	W	L	R	G	D	E	N	A	L	T	A	Q	Q	K	K	G	Y	Q	L	F	.	.	.	.	K	D	N	K	C	A	T	C	H	G	G	I	I	L
Query Conservation																																																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	K	I	T	A	L	A	D	Y	F	N	A	Q	K	P	P	M	Q	S	.	.	.	.	.	.	.	.	S	G	I	K	H	A	G	A	K	E	G	K	A	I	F	N	Q	G	V	T	N	E	Q	I	P	A	C	M	E	C	H	G	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S		S			.	.	.	.	.	.	.	.		S				T	T												B	G	G	G	T	B			T						T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
																					73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		G	G	R	S	F	E	P	L	G	L	K	K	D	F	N	F	G	E	I	T	A	A	D	I	G	R	M	N	V	T	K	E	E	R	D	K	L	R	Q	K	V	P	G	L	R	N	V	A	L	T	A	P	Y	F	H	R	G	D	V	P	T	L	D	G	A	V	K	L	M	L	R	Y	Q	V	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		D	G	Q	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	F	P	R	L	A	G	Q	R	Y	G	Y	.	.	.	.	.	.	.	.	I	I	Q	Q	L	T	Y	F	H	N	G	T	R	V	N	T	L	M	N
Template Known Secondary structure		T	S			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B				T	T						.	.	.	.	.	.	.	.											T	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130																																				.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
					436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	E	L	P	Q	E	D	V	D	D	I	V	A	F	L	H	S	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Q	I	A	K	N	I	T	V	A	Q	M	K	D	V	A	A	Y	L	S	S	L
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions