Job Description P0AAN1 Confidence 3.51% Date Thu Jan 5 11:13:20 GMT 2012 Rank 30 Aligned Residues 51 % Identity 12% Template c3eg9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	C	V	I	T	P	W	M	L	S	A	V	I	F	P	G	P	D	Q	L	W	P	L	R	K	V	S	E	K	I	G	L	Q	L	P	Y	G	T	M	T	F	T	V	G	E	L	D	G	V	S	Q	Y	L	S	C	S	L	M
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		V	A	A	L	F	T	P	L	.	.	.	.	.	.	.	.	K	E	R	P	D	L	P	P	I	Q	Y	E	P	V	L	C	S	R	T	T	C	R	A	V	L	N	P	L	C	Q	V	D	Y	R	A	K	L	W	A	C	N	F	C
Template Known Secondary structure		S						T	T	.	.	.	.	.	.	.	.				T	T	S					S				B		S		T	T	T			B			T	T	S				T	T	T	T					T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions