Return to main results Retrieve Phyre Job Id

Job DescriptionP39308
Confidence3.63%DateThu Jan 5 11:59:11 GMT 2012
Rank97Aligned Residues12
% Identity58%Templatec3sooB_
PDB info PDB header:rna binding proteinChain: B: PDB Molecule:line-1 type transposase domain-containing protein 1; PDBTitle: crystal structure of a line-1 type transposase domain-containing2 protein 1 (l1td1) from homo sapiens at 2.73 a resolution
Resolution2.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.. ......
Predicted Secondary structure 



.
Query SS confidence 





.





Query Sequence  LDLSDW. QAFNKL
Query Conservation 



 
.
 

  
Alig confidence 





.





Template Conservation 


 


 

  
Template Sequence  LDISQWSNVFNIL
Template Known Secondary structure 




Template Predicted Secondary structure 
Template SS confidence 












   254.....260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions