Job Description P39308 Confidence 9.53% Date Thu Jan 5 11:59:11 GMT 2012 Rank 30 Aligned Residues 74 % Identity 19% Template c3o2uB_ PDB info PDB header:ligase Chain: B: PDB Molecule:nedd8-conjugating enzyme ubc12; PDBTitle: s. cerevisiae ubc12 Resolution 2.00 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.											.	.	.
Query SS confidence																																			.	.	.	.	.	.											.	.	.
Query Sequence		W	N	H	E	A	T	L	D	N	I	H	A	Q	K	Y	N	K	A	Y	A	G	A	R	L	T	A	E	L	K	Y	L	L	Q	.	.	.	.	.	.	D	V	E	S	F	E	P	N	S	K	.	.	.	Y	T	I	H	E	V	V	L	G	P	G	Y	G	T	P	D	Y	T	G	Q	T	I	G	Y	V	V	T	L
Query Conservation																																			.	.	.	.	.	.											.	.	.
Alig confidence																																			.	.	.	.	.	.											.	.	.												.				.
Template Conservation																																																																	.				.
Template Sequence		L	Q	K	K	K	Q	K	E	N	E	N	S	S	S	P	N	L	S	A	A	R	I	R	L	K	R	D	L	D	S	L	D	L	P	P	T	V	T	L	N	V	I	T	S	P	D	S	A	D	R	S	Q	S	P	K	L	E	V	I	V	R	P	D	.	E	G	Y	.	Y	N	Y	G	S	I	N	F	N	L	D	F
Template Known Secondary structure																															T					T	T									T	T		S		T	T	S											S	.	S	S	T	.	T	T	T
Template Predicted Secondary structure																																																																	.				.
Template SS confidence
		1007	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.		1070	.	.		.	.	.	.	.	.	.	1080	.	.	.	.
		159	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	Q	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	V	Y	P
Template Known Secondary structure			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1087	.	.	1090	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions