Return to main results Retrieve Phyre Job Id

Job DescriptionP30843
Confidence47.42%DateThu Jan 5 11:46:27 GMT 2012
Rank285Aligned Residues87
% Identity18%Templated1rd5a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution2.02

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.. .......60 .........70.........80... ....
Predicted Secondary structure 








..







....................





















..
Query SS confidence 




















. .







. . . . . . . . . . . . . . . . . . . .






















. .



Query Sequence  TARMAEQSLEAGHYSLVVLDL. . GLPDEDGL. . . . . . . . . . . . . . . . . . . . HFLARIRQKKYTLPVLILTARDT. . LTDK
Query Conservation     
 
        





 ..      
 ....................     

       

 

    ..    
Alig confidence 




















..







....................









.











..



Template Conservation          
   


 



 




  

  
      

  
         
  

   . 




  
 
      
Template Sequence  TTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL. SCPVVLLSYYKPIMFRSL
Template Known Secondary structure  TT
SS


S

TTS
TTT

GGG
.SS


SS

T
Template Predicted Secondary structure 


















.







Template SS confidence 















































































   33......40.........50.........60.........70.........80.........90... ......100.........110.
 
   88.90.........100.........110.........
Predicted Secondary structure 

















Query SS confidence 































Query Sequence  IAGLDVGADDYLVKPFALEELHARIRALLRRH
Query Conservation        
      

     
   
       
Alig confidence 































Template Conservation       

   
    
               
Template Sequence  AKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNN
Template Known Secondary structure  TT


TT

TTTTT
Template Predicted Secondary structure 













Template SS confidence 































   112.......120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions