Return to main results Retrieve Phyre Job Id

Job DescriptionP30843
Confidence52.07%DateThu Jan 5 11:46:27 GMT 2012
Rank273Aligned Residues92
% Identity15%Templated1qapa1
SCOP infoTIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.. .......30.........40.........50.........60.........70......
Predicted Secondary structure 


......




































Query SS confidence 



















. . . . . .





















































Query Sequence  ILIVEDDTLLLQGLILAAQT. . . . . . EGYACDSVTTARMAEQSLEAGHYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVL
Query Conservation 






      
   
  ...... 
  
  
    
 
        





       
      

       

Alig confidence 



















......





















.






....



















Template Conservation 


  


   
    
    
   
   
 


 
  

  
   

.
 
 

 ....         
      
 
 
Template Sequence  FLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGA. DIIMLDN. . . . FNTDQMREAVKRVNGQARLE
Template Known Secondary structure 
SSSTTS
SSTT
.SSS....

TT
TT

Template Predicted Secondary structure 










.


....





Template SS confidence 















































































   182.......190.........200.........210.........220......... 230...... ...240.........250......
 
   77..80.........90.........100
Predicted Secondary structure 











Query SS confidence 























Query Sequence  ILTARDTLTDKIAGLDVGADDYLV
Query Conservation   

              
      
Alig confidence 




.

















Template Conservation 




.   

      


 
 
Template Sequence  VSGNV. TAETLREFAETGVDFISV
Template Known Secondary structure 


S.
TT
S
Template Predicted Secondary structure 


.




Template SS confidence 























   257..260. ........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions