Return to main results Retrieve Phyre Job Id

Job DescriptionP30843
Confidence96.28%DateThu Jan 5 11:46:27 GMT 2012
Rank150Aligned Residues59
% Identity20%Templated1j5ya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190.........200.........210........
Predicted Secondary structure 






























Query SS confidence 



































































Query Sequence  TPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVA
Query Conservation 
  
  

  
      
 

  
   

         

  

 





    
 



 

 
  
Alig confidence 















.










.....
















..








.





Template Conservation   

   

  
     . 

  


  
..... 

 


 


  
   ..
  
     .

 
  
Template Sequence  QERLKSIVRILERSKE. PVSGAQLAEEL. . . . . SVSRQVIVQDIAYLRSL. . GYNIVATPR. GYVLAG
Template Known Secondary structure 
SS.
B
.....TS
..T


TT.


Template Predicted Secondary structure 


.


.....



..



.



Template SS confidence 



































































   8.10.........20... ......30.... .....40.........50. ........60 ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions