Job Description P30843 Confidence 33.02% Date Thu Jan 5 11:46:27 GMT 2012 Rank 349 Aligned Residues 103 % Identity 13% Template c3lkbB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:probable branched-chain amino acid abc PDBTitle: crystal structure of a branched chain amino acid abc2 transporter from thermus thermophilus with bound valine Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		K	I	L	I	V	E	D	D	T	L	.	.	.	.	L	L	Q	G	L	I	L	A	A	Q	T	E	G	Y	A	C	D	S	V	T	.	.	.	.	.	.	.	T	A	R	M	A	E	Q	S	L	E	A	G	H	Y	S	L	V	V	L	D	L	G	L	P	D	E	D	G	L	H	F	L	A	R	I	R	Q	K	K
Query Conservation												.	.	.	.																					.	.	.	.	.	.	.
Alig confidence												.	.	.	.																					.	.	.	.	.	.	.																												.	.
Template Conservation																																																																						.	.
Template Sequence		K	V	A	L	V	V	H	P	S	P	F	G	R	A	P	V	E	D	A	R	K	A	A	R	E	L	G	L	Q	I	V	D	V	Q	E	V	G	S	G	N	L	D	N	T	A	L	L	K	R	F	E	Q	A	G	V	E	Y	V	V	H	Q	N	V	A	G	P	V	A	.	.	N	I	L	K	D	A	K	R	L	G
Template Known Secondary structure									S	S					T	T												T											T	T														T	T								S							.	.									T	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	L	P	V	L	I	L	T	A	R	D	T	L	T	D	K	I	A	G	L	D	V	G	A	D	D	Y	L	V	K	P	F	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	M	R	H	L	G	A	H	Y	T	G	G	P	D	L	I	A	L	A	G	D	A	A	E	G	F	L	W	A	T	S	F	Y	M	A
Template Known Secondary structure										G	G	G		S								G	G	G	G	T	T						S	B			T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions