 |
Job Description | P30843 | Confidence | 21.22% | Date | Thu Jan 5 11:46:27 GMT 2012 |
Rank | 459 | Aligned Residues | 97 |
% Identity | 8% | Template | c3igsB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:n-acetylmannosamine-6-phosphate 2-epimerase 2; |
PDBTitle: structure of the salmonella enterica n-acetylmannosamine-6-phosphate2 2-epimerase
|
Resolution | 1.50 Å |
|
 |
  |   |
3 | . | . | . | . | |
|
|
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | I | V | E | . |
. |
. |
D | D | T | L | L | L | Q | G | L | I | L | A | A | Q | T | E | G | Y | A | C | D | S | V | T | T | A | R | M | A | E | Q | S | L | E | A | G | H | Y | S | L | V | V | L | D | L | G | L | . |
. |
. |
. |
. |
P | D | E | D | G | L | H | F | L | A | R | I | R | Q | K | K | Y | T | L | P |
Query Conservation |   |
|
|
|
|
| . | . | . |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |
|
|
Template Sequence |   |
I | A | V | D | G | T | A | R | Q | R | P | V | A | V | E | A | L | L | A | R | I | H | H | H | H | L | L | T | X | A | D | C | S | S | V | D | D | G | L | A | C | Q | R | L | G | A | D | I | I | G | T | T | X | S | G | Y | T | T | P | D | T | P | E | E | P | D | L | P | L | V | K | A | L | . |
H | D | A | G | C | R |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| S | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| T | T | T | T |
| S | S | S |
|
|
| S | S |
|
|  |  |  |  |  |  |  | . |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
. | . | . | . | . | 180 |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | I | L | T | A | R | D | T | L | T | D | K | I | A | G | L | D | V | G | A | D | D | Y | L | V |
Query Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
V | I | A | E | G | R | Y | N | S | P | A | L | A | A | E | A | I | R | Y | G | A | W | A | V | T | V |
Template Known Secondary structure |   |
 |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|