Job Description P30843 Confidence 49.94% Date Thu Jan 5 11:46:27 GMT 2012 Rank 279 Aligned Residues 91 % Identity 16% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		2	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.																								.	.	.	.	.	.	.																																					.	.	.
Query SS confidence										.	.	.																								.	.	.	.	.	.	.																																					.	.	.
Query Sequence		K	I	L	I	V	E	D	D	.	.	.	T	L	L	L	Q	G	L	I	L	A	A	Q	T	E	G	Y	A	C	D	S	V	T	T	.	.	.	.	.	.	.	A	R	M	A	E	Q	S	L	E	A	G	H	Y	S	L	V	V	L	D	L	G	L	P	D	E	D	G	L	H	F	L	A	R	I	R	Q	.	.	.
Query Conservation										.	.	.																								.	.	.	.	.	.	.																																					.	.	.
Alig confidence										.	.	.																								.	.	.	.	.	.	.																																					.	.	.
Template Conservation
Template Sequence		S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R
Template Known Secondary structure										T	T															T	T							S	T	T																		T		S								S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
			69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	K	Y	T	L	P	V	L	I	L	T	A	R	D	T	L	T	D	K	I	A	G	L	D
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	T	K	P	N	L	V	I	F	V	G	D	A	L	A	G	N	A	I	V	E	Q	A	R	Q
Template Known Secondary structure						S								T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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