Return to main results Retrieve Phyre Job Id

Job DescriptionP30843
Confidence99.77%DateThu Jan 5 11:46:27 GMT 2012
Rank97Aligned Residues113
% Identity18%Templatec2j48A_
PDB info PDB header:transferaseChain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60......... 70.........
Predicted Secondary structure 
































..









Query SS confidence 



































































. .









Query Sequence  KILIVEDDTLLLQGLILAAQTEGYACDSVTTARMAEQSLEAGHYSLVVLDLGLPDEDGLHFLARIRQK. . KYTLPVLILT
Query Conservation 







      
   
   
  
  
    
 
        





       
      

  ..     

 

Alig confidence 



































































..









Template Conservation 






       
   
   
  
        

  
    




 
  
    
      

        


  
Template Sequence  HILLLEEEDEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFL
Template Known Secondary structure 


TT
S


S
STT

TT


SS


Template Predicted Secondary structure 

























Template SS confidence 















































































   629630.........640.........650.........660.........670.........680.........690.........700........
 
   80.........90.........100.........110.......
Predicted Secondary structure 


















Query SS confidence 





































Query Sequence  ARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLR
Query Conservation                
      

     
   
     
Alig confidence 





...




























Template Conservation        ...     
    
 

     
   
   
 
Template Sequence  GEPPVD. . . PLLTAQASAILSKPLDPQLLLTTLQGLCP
Template Known Secondary structure  SS

SS...
S
SS
STTTT

Template Predicted Secondary structure 
...









Template SS confidence 





































   709710.... .....720.........730.........740...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions