Job Description P30843 Confidence 100.00% Date Thu Jan 5 11:46:27 GMT 2012 Rank 1 Aligned Residues 218 % Identity 34% Template c1ys7B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+ Resolution 1.58 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	I	V	E	D	D	T	L	L	L	Q	G	L	I	L	A	A	Q	T	E	G	Y	A	C	D	S	V	T	T	A	R	M	A	E	Q	S	L	E	A	G	H	Y	S	L	V	V	L	D	L	G	L	P	D	E	D	G	L	H	F	L	A	R	I	R	Q	K	K	Y	T	L	P	V	L	I	L	T	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	L	V	V	D	D	D	S	D	V	L	A	S	L	E	R	G	L	R	L	S	G	F	E	V	A	T	A	V	D	G	A	E	A	L	R	S	A	T	E	N	R	P	D	A	I	V	L	D	I	N	M	P	V	L	D	G	V	S	V	V	T	A	L	R	A	M	D	N	D	V	P	V	C	V	L	S	A	R
Template Known Secondary structure								S															T	T							S	S											S			S						S	S		S	S	S												T	T											T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		D	T	L	T	D	K	I	A	G	L	D	V	G	A	D	D	Y	L	V	K	P	F	A	L	E	E	L	H	A	R	I	R	A	L	L	R	R	H	N	N	Q	G	E	S	E	L	I	V	.	.	.	G	N	L	T	L	N	M	G	R	R	Q	V	W	M	G	G	E	E	L	I	L	T	P	K	E	Y	A	L	L
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		S	S	V	D	D	R	V	A	G	L	E	A	G	A	D	D	Y	L	V	K	P	F	V	L	A	E	L	V	A	R	V	K	A	L	L	R	R	R	G	S	T	A	T	S	S	S	E	T	I	T	V	G	P	L	E	V	D	I	P	G	R	R	A	R	V	N	G	V	D	V	D	L	T	K	R	E	F	D	L	L
Template Known Secondary structure		T												T								S																T	S	S	S		S					S					T	T					T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		S	R	L	M	L	K	A	G	S	P	V	H	R	E	I	L	Y	N	D	I	Y	N	W	D	N	E	P	S	T	N	T	L	E	V	H	I	H	N	L	R	D	K	V	.	.	.	G	K	A	R	I	R	T	V	R	G	F	G	Y	M	L	V	A	N
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		A	V	L	A	E	H	K	T	A	V	L	S	R	A	Q	L	L	E	L	V	W	G	Y	D	F	A	A	D	T	N	V	V	D	V	F	I	G	Y	L	R	R	K	L	E	A	G	G	P	R	L	L	H	T	V	R	G	V	G	F	V	L	R	M	Q
Template Known Secondary structure							T	T	T												T	T				S																														T	T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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