Job Description P30843 Confidence 31.61% Date Thu Jan 5 11:46:27 GMT 2012 Rank 356 Aligned Residues 77 % Identity 10% Template c1s3mA_ PDB info PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	L	I	V	E	D	D	T	L	L	L	Q	G	L	I	L	A	A	Q	T	E	G	Y	A	C	D	S	V	T	T	A	R	M	A	E	Q	S	L	E	A	G	H	Y	S	L	V	V	L	D	L	G	L	P	D	E	D	G	L	H	F	L	A	R	I	R	Q	K	K	Y	T	L	P	V	L	I	L	T	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		M	K	I	G	I	M	S	D	T	H	D	H	L	P	N	I	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	E	I	F	N	D	E	N	V	E	T	V	I	H	C	G	D	F	V	S	L	F	V	I	K	E	F	E	N	L	.	.	.	.	.	N	A	N	I	I	A	T	Y	G
Template Known Secondary structure											T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S			S						S				S	T						G	G	G		.	.	.	.	.		S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.																		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	T	L	T	D	K	I	A	G	L	D	V	G	A	D	D	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	D	G	E	R	C	K	L	K	E	W	L	K	D	I	N	E	E
Template Known Secondary structure		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions