Job Description P77393 Confidence 7.54% Date Thu Jan 5 12:28:28 GMT 2012 Rank 18 Aligned Residues 64 % Identity 36% Template d1pvja_ SCOP info Cysteine proteinases Cysteine proteinases Papain-like Resolution 3.00

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	H	N	N	L	M	P	Y	T	Q	Q	S	I	L	N	T	V	K	N	N	Q	L	P	E	D	I	K	S	S	L	V	S	C	V	D	I	F	K	V	L	I	K	Q	Y	Y	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		N	P	Y	N	L	L	T	P	V	I	.	.	.	.	.	E	K	V	K	P	G	E	Q	S	F	V	G	Q	H	A	A	T	G	C	V	A	T	A	T	A	Q	I	M	K	Y	H	N	Y	P	N	K	G	L	K	D	Y	T	Y	T	L	S	S	N	N	P	Y	F	N	H	P	K	N	L	F	A	A	I	S	T	R
Template Known Secondary structure		T	T	G	G	G	G	S		B		.	.	.	.	.		S			T	T	S				T	T	S	B																		T			S	B			S								T	T		T	T	S		S	S							G	G	G
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
												55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Y	D	C	R	D	D	L	V	D	D	D	K	L	I	H	L	M	A	A	V
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Y	N	W	N	N	I	L	P	T	Y	S	G	R	E	S	N	V	Q	K	M	A	I	S	E	L	M	A	D	V
Template Known Secondary structure		B			T	T	T	S		S				S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions