Job Description Q46877 Confidence 99.85% Date Thu Jan 5 12:35:29 GMT 2012 Rank 54 Aligned Residues 144 % Identity 16% Template d1ydga_ SCOP info Flavodoxin-like Flavoproteins WrbA-like Resolution 2.00

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		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																						.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.
Template Sequence		K	L	A	I	V	F	Y	S	S	T	G	T	G	Y	A	M	A	Q	E	A	A	E	A	G	R	A	A	G	.	.	A	E	V	R	L	L	K	V	R	E	T	A	P	Q	D	V	I	D	G	Q	D	A	W	K	A	N	I	E	A	M	K	D	V	P	E	A	T	P	A	D	L	E	W	A	E	A	I	V	F	S
Template Known Secondary structure										S	S	S																T	T	.	.												S						T	T											T	T	T	S		B										S
Template Predicted Secondary structure																														.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.																.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	T	M	N	N	V	M	M	P	K	I	A	G	L	V	E	E	M	.	.	.	.	T	G	L	R	F	R	N	K	R	A	S	A	F	G	S	.	.	.	.	H	G	W	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.																.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	T	R	F	G	G	A	T	S	Q	M	R	A	F	I	D	T	L	G	G	L	W	S	S	G	K	L	A	N	K	T	F	S	A	M	T	S	A	Q	N	V	N	G	G	Q	E	T	T	L	Q	T	L	Y	M	T	A	M	H	W	G	A	V	L	T	P	P	G	Y	T	D	E	V	I	F	K	S	G	G	N
Template Known Secondary structure						T	T												T	T						T	T	T	T	T	T										S	S	T	T	S	S	T	T												T	T	T							T	T		S						T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
						369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	S	L	K	A	K	W	R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	A	R	Q	W	A	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		P	Y	G	A	S	V	T	A	N	G	Q	P	L	L	E	N	D	R	A	S	I	R	H	Q	V	R	R	Q	V	E	L	T	A	K
Template Known Secondary structure		S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions