Job Description Q46877 Confidence 20.29% Date Thu Jan 5 12:35:29 GMT 2012 Rank 423 Aligned Residues 193 % Identity 12% Template d1vl1a_ SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like NagB-like Resolution 1.55

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V	M	M	P	K	I	A	G	L	V	E	E	M	T	G	L	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.						.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.						.	.	.
Template Sequence		T	V	I	Y	L	L	E	D	G	Y	V	D	F	V	V	E	K	I	R	T	K	M	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	K	D	K	I	F	V	V	L	A	.	.	G	G	R	T	P	.	.	.	L	P	V	Y	E	K	L	A	E	Q	K
Template Known Secondary structure								S	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S								.	.		S	T	T		.	.	.								T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.						.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																							.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		F	R	N	K	R	A	S	A	F	G	S	H	G	W	.	.	.	.	.	S	G	G	A	V	D	R	L	S	T	R	L	Q	D	A	G	F	E	M	S	L	S	L	K	A	K	W	R	P	D	Q	D	A	L	K	L	C	R	E	H	G	R	E	I	A	R	Q	W	A	L	A	P	L	P	Q	S	T	V	N	T	V
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.
Template Conservation
Template Sequence		F	P	W	N	R	I	H	F	F	L	S	D	E	R	Y	V	P	L	D	S	D	Q	S	N	F	R	N	I	N	E	V	L	F	S	R	A	K	I	P	S	G	N	V	H	Y	V	D	T	S	L	P	I	E	K	A	C	E	K	Y	E	R	E	I	R	S	A	T	D	Q	F	D	L	A	I	L	G	M	G	P	D
Template Known Secondary structure				G	G	G						S				S	S		T	T	S	T	T										T	T	T	T	S				G	G	G						T	T	S																		S	S		S								T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	E	E	T	S	A	T	T	T	A	D	L	G	P	R	M	Q	C	S	V	C	Q	W	I	Y	D	P	A	K	G	E	P	M	Q	D	V	A	P	G	T	P	W	S	E	V	P	D	N	F	L	C	P	E	C	S	L	G	K	D	V	F	E	E	L	A	S	E	A	K
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		G	H	V	A	S	I	F	D	L	E	T	G	N	K	D	N	L	V	T	F	T	.	.	.	.	.	D	P	S	G	D	P	K	V	P	R	V	T	L	T	F	R	A	L	N	T	S	L	Y	V	L	F	L	I	R	G	K	E	K	I	N	R	L	T	E	I	L	K	D	T
Template Known Secondary structure		S		B	T	T	B		S					T		S	S	S					.	.	.	.	.	S	S	B	T	T	T	T	B											T	T		S								S												T	T
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions