|   |
254 | . | . | . | . | . | 260 | . | |
|
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | I | F | Y | D | T | M | . |
. |
S | N | N | T | R | M | M | A | D | A | I | A | Q | G | I | A | E | T | D | P | R | V | A | V | K | I | F | N | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | R | S | D | K | N | E | I | L | T | N | V | F | R | S | K | G | V | L | V | G | T | S | T | M | N | N | V | M | M | P |
Query Conservation |   |
|   |
|
|
|   |
|   | . | . |
|
|
|
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   | . | . |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |
|   |
Template Sequence |   |
X | L | V | I | N | G | T | P | R | K | H | G | R | T | R | I | A | A | S | Y | I | A | A | L | Y | H | T | D | L | . |
. |
I | D | L | S | E | F | V | L | P | V | F | N | G | E | A | E | Q | S | E | L | L | K | V | Q | E | L | K | Q | R | V | T | K | A | D | A | I | V | L | L | S | P | E | Y | H | S | G | X | S | G |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  | . | . |  |  | T | T | T | S |
|
|
|
|
|
|
|
|  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |
| B | T | T | B |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | |
|
|
. | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 380 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | A | G | L | V | E | E | M | T | G | L | R | F | R | N | K | R | A | S | A | F | G | S | H | G | . |
. |
. |
W | S | G | G | A | V | D | R | L | S | T | R | L | Q | D | A | G | F | E | M | S | L | S | L | K | A | K | W | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | P | D | Q | D | A | L | K | L | C | R | E | H | G |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
| . | . | . |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | L | K | N | A | L | D | F | L | S | S | E | Q | F | K | Y | K | P | V | A | L | L | A | V | A | G | G | G | K | G | G | I | N | A | L | N | N | X | R | T | V | X | R | G | V | Y | A | N | V | I | P | K | Q | L | V | L | D | P | V | H | I | D | V | E | N | A | T | V | A | E | N | I | K | E | S | I | K | E | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|
| S | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
| S |
|
|  |  |  |
| G | G | G |  |  | G | G | G | T |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
  |   |
390 | . | . | . | . | . | . | . | . | . | 400 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | I | A | R | Q | W | A | L | A | P |
Query Conservation |   |
|   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|   |   |
Template Sequence |   |
E | E | L | S | X | F | A | K | A | G | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . |
  |