Return to main results Retrieve Phyre Job Id

Job DescriptionQ46877
Confidence40.07%DateThu Jan 5 12:35:29 GMT 2012
Rank304Aligned Residues60
% Identity13%Templatec3uoaB_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: B: PDB Molecule:mucosa-associated lymphoid tissue lymphoma translocation PDBTitle: crystal structure of the malt1 paracaspase (p21 form)
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250.........260... ......270.........280.........290...
Predicted Secondary structure 










....................








Query SS confidence 





























. . . . . . . . . . . . . . . . . . . .





























Query Sequence  NPTQIVELYLKWAADYQEDRITIFYDTMSN. . . . . . . . . . . . . . . . . . . . NTRMMADAIAQGIAETDPRVAVKIFNVARS
Query Conservation      

  
  
       

 


 
 

....................

  

  

 

   
  
 
        
Alig confidence 





























....................





























Template Conservation 
   
  

  
       
  







    
 







         
    

  
        
 





 
Template Sequence  TEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRK
Template Known Secondary structure 
T

TT
S
TT

TT

SS

GGGSTT
SS


Template Predicted Secondary structure 































Template SS confidence 















































































   387..390.........400.........410.........420.........430.........440.........450.........460......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions