Job Description Q46877 Confidence 23.02% Date Thu Jan 5 12:35:29 GMT 2012 Rank 397 Aligned Residues 109 % Identity 8% Template c3uk7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d Resolution 2.05 Å

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																														.	.	.																																											.	.	.	.	.	.	.
Query SS confidence																														.	.	.																																											.	.	.	.	.	.	.
Query Sequence		I	A	T	S	H	G	V	V	W	R	D	N	P	T	Q	I	V	E	L	Y	L	K	W	A	A	D	Y	Q	.	.	.	E	D	R	I	T	I	F	Y	D	T	M	S	N	N	T	R	M	M	A	D	A	I	A	Q	G	I	A	E	T	D	P	R	V	A	V	K	I	F	N	V	A	R	.	.	.	.	.	.	.
Query Conservation																														.	.	.																																											.	.	.	.	.	.	.
Alig confidence									.	.	.																			.	.	.										.	.																																.	.	.	.	.	.	.
Template Conservation									.	.	.																															.	.
Template Sequence		L	I	T	A	A	T	Y	.	.	.	E	G	H	P	E	F	I	Q	L	F	V	K	A	L	G	G	K	I	T	G	A	N	K	R	I	L	F	L	C	G	.	.	D	Y	X	E	D	Y	E	V	K	V	P	F	Q	S	L	Q	A	L	G	C	Q	V	D	A	V	C	P	E	K	K	A	G	D	R	C	P	T	A
Template Known Secondary structure						S	S	G	.	.	.	G	G												T	T					S											.	.	T	T																	T								T	T			T	T
Template Predicted Secondary structure									.	.	.																															.	.
Template SS confidence
		169	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
																							293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	K	N	E	I	L	T	N	V	F	R	S	K	G	V	L	V	G	T	S	T	M	N	N	V	M	M	P	K	I	.	.	.	A	G	L	V	E	E	M	T	G	L	R	F	R	N	K	R	A	S	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.										.	.		.	.									.	.	.
Template Conservation																														.	.										.	.		.	.
Template Sequence		I	H	D	F	E	G	D	Q	T	Y	S	E	K	P	G	H	T	F	A	L	T	T	N	F	D	D	L	V	.	.	S	S	S	Y	D	A	L	V	I	.	.	P	.	.	G	G	R	A	P	E	Y	L	A	L	N	E	H	V	L	N	I	V	K	E	F	X	N	S	E	K	P	V	A	S
Template Known Secondary structure							S	S	S	S													S		T	T	T			.	.	G	G	G		S					.	.		.	.		B	S						T	T														T	T
Template Predicted Secondary structure																														.	.										.	.		.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280			.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions